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Database Name/Link | Data Description | Category | Subcategory |
|---|---|---|---|
1000 Genomes Project | Deep catalog of human genetic variation. | Genomics & Multi-Omics | Human Genomics |
ADNI (Alzheimer Disease Neuroimaging Initiative) | Neuroimaging and biomarker database with Parkinson AD sub-studies. | Disease-Specific Data | Alzheimers Disease |
AGRIS (FAO International System for Agricultural Science and Technology) | A database providing information on food systems, agriculture, and related nutritional outcomes. | Agriculture & Food Systems | Food Systems |
AHRQ's SDOH Data | Provides details across five key SDOH domains:
Social context, such as age, race/ethnicity, veteran status.
Economic context, such as income, unemployment rate.
Education
Physical infrastructure, such as housing, crime, transportation.
Healthcare context, such as health insurance. | Public Health & Epidemiology | Health Disparities |
AIMI Dataset Index: | Managed by the Stanford Center for Artificial Intelligence in Medicine and Imaging, this repository features curated and annotated clinical imaging data across various modalities, including echocardiograms, brain CT scans, MRIs, radiographs, and ultrasounds. | Imaging & AI Datasets | REVIEW |
AMP PD (Parkinson's Disease) | Public-private partnership providing large-scale Parkinson disease omics data. | Disease-Specific Data | Parkinsons Disease |
AMP-AD (Alzheimer Disease) | Precision medicine partnership integrating multi-omics Alzheimer data. | Disease-Specific Data | Alzheimers Disease |
AYUSH Research Portal | A governmental database offering information on research in Ayurveda, Yoga & Naturopathy, Unani, Siddha, and Homeopathy, including details on medicinal plants and their therapeutic uses. | Traditional & Integrative Medicine | Ayurveda / AYUSH |
Academic Torrents | A distributed system for sharing enormous datasets, including those used in machine learning research | General Research Repositories | Large Dataset Distribution |
All of Us Research Program | A national project collecting diverse health and genetic data. | Clinical & Cohort Data | REVIEW |
Allen Brain Atlas | A comprehensive mapping of gene expression in the human and mouse brain. | Neuro Data | Brain Gene Expression |
AlphaFold Protein Structure Database | Provides AI-predicted 3D structures of proteins, facilitating advancements in drug discovery and synthetic biology. | Genomics & Multi-Omics | Proteomics |
Alzheimer's Disease Neuroimaging Initiative (ADNI) | Longitudinal study tracking Alzheimer's disease progression and risk factors. | Disease-Specific Data | Alzheimers Disease |
Alzheimer's Disease Sequencing Project (ADSP) | NIH initiative sequencing genomes of Alzheimer? patients and controls. | Disease-Specific Data | Alzheimers Disease |
America's Health Rankings | Provides comprehensive data on various health measures, including behaviors, community and environment, policy, clinical care, and outcomes, offering insights into how dietary habits influence health across different populations. | Public Health & Epidemiology | Nutrition Data |
American Community Survey (ACS) | The American Community Survey (ACS) helps local officials, community leaders, and businesses understand the changes taking place in their communities. It is the premier source for detailed population and housing information about our nation. | Public Health & Epidemiology | Population Health |
American Gut Project | Crowdsourced study of the human microbiome. | Imaging & AI Datasets | Multimodal Imaging |
An Open-Source Dataset on Dietary Behaviors and DASH Eating Plan Optimization Constraints | A dataset based on dietary behaviors, demographics, and pre-existing conditions, suitable for input to linear optimization models. | Public Health & Epidemiology | Nutrition Data |
Area Deprivation Index (ADI) | Neighborhood-level measure of socioeconomic disadvantage linked to health outcomes. | Public Health & Epidemiology | Health Disparities |
Area Deprivation Index Datasets | Measures socio-economic disadvantage at the neighborhood level, widely used in health disparities research. | Public Health & Epidemiology | Health Disparities |
ArrayExpress | A repository for functional genomics experiments. | Imaging & AI Datasets | Multimodal Imaging |
Atlas of Genetics and Cytogenetics in Oncology and Haematology | An online journal and database covering chromosomes, genes, and cancers, integrating various types of knowledge in a single resource. | Disease-Specific Data | Cancer |
Australian Antarctic Data Centre (AADC) | A repository for Antarctic research data. | Imaging & AI Datasets | Multimodal Imaging |
Awesome Healthcare Datasets | Curated list of healthcare datasets for ML in clinical data, imaging, and genomics. | Imaging & AI Datasets | Multimodal Imaging |
BRENDA (The Comprehensive Enzyme Information System) | The comprehensive enzyme information system, providing data on enzyme functions, structures, and properties, supporting research in metabolism, drug development, and biotechnology. | Imaging & AI Datasets | Multimodal Imaging |
Behavioral Risk Factor Surveillance System (BRFSS) | State-based surveillance system tracking chronic diseases and health behaviors. | Public Health & Epidemiology | Population Health |
Berkeley Single Cell Computational Microscopy (BSCCM) Dataset | Contains over 12 million images of individual white blood cells, captured with multiple illumination patterns on an LED array microscope, aimed at advancing computational microscopy and computer vision applications. | REVIEW | REVIEW |
Bgee | Offers gene expression data across species and conditions, aiding AI-driven research in developmental biology and disease modeling. | Genomics & Multi-Omics | Transcriptomics |
BigBrain Atlas | Ultra-high-resolution human brain atlas for neuroscience research. | Neuro Data | Brain Atlas |
BigQuery Public Datasets (Healthcare & Life Sciences) | Google Cloud's BigQuery provides large-scale, AI-ready datasets for healthcare and clinical trial analytics. | General Research Repositories | Multidisciplinary Data |
BindingDB | A public, web-accessible database of measured binding affinities, focusing on the interactions of proteins considered to be drug-targets with small, drug-like molecules. | Imaging & AI Datasets | Multimodal Imaging |
BioCyc Database Collection | A collection of Pathway/Genome Databases (PGDBs) that provide reference to genome and metabolic pathway information for thousands of organisms, supporting multiomics analyses. | Imaging & AI Datasets | Multimodal Imaging |
BioGRID | A biomedical interaction repository with data compiled through comprehensive curation efforts, encompassing protein-protein interactions, genetic interactions, chemical interactions, and post-translational modifications across multiple species. | Imaging & AI Datasets | Multimodal Imaging |
BioStudies | A repository for biological study data. | General Research Repositories | Multidisciplinary Data |
Biological General Repository for Interaction Datasets (BioGRID) | A protein-protein interaction database. | Imaging & AI Datasets | Multimodal Imaging |
BiomedCLIP Dataset | A multimodal biomedical foundation model pretrained from fifteen million scientific image-text pairs, supporting various biomedical imaging tasks and applications. | Imaging & AI Datasets | Multimodal Imaging |
Black Women's Health Study (BWHS) | A long-term observational study initiated in 1995, following 59,000 Black women to investigate health issues, including maternal health disparities, with the goal of improving health outcomes. | Public Health & Epidemiology | Health Disparities |
Brain Genomics Superstruct Project (GSP) | Brain imaging and cognitive data for genetic and neuroscience research. | Imaging & AI Datasets | Multimodal Imaging |
CARDIA (Coronary Artery Risk Development in Young Adults) - Obesity Data | Study tracking obesity and heart disease risk from young adulthood. | Clinical & Cohort Data | Longitudinal Cohort |
CARDIOGRAMplusC4D Consortium | Large-scale genetic database of cardiovascular diseases. | Clinical & Cohort Data | Longitudinal Cohort |
CDC Environmental Health Tracking Network (EPHT) | National environmental public health tracking program providing health and exposure data. | REVIEW | REVIEW |
CDC Social Determinants of Health Database | Links between social factors (income, housing, transport) and disease. | Imaging & AI Datasets | Multimodal Imaging |
CDC Social Vulnerability Index (SVI) | Measures community vulnerability to disasters and pandemics using 15 U.S. Census social factors (poverty, housing, minority status, access to transportation, etc.). | Public Health & Epidemiology | Population Health |
CDC's Behavioral Risk Factor Surveillance System (BRFSS) | Large dataset for public health and disease risk modeling. | Public Health & Epidemiology | Population Health |
CFDE DATA PORTAL Search Common Fund Programs' Metadata and Processed Datasets. | CFDE DATA PORTAL Search Common Fund Programs' Metadata and Processed Datasets. | REVIEW | REVIEW |
CKAN | An open-source data portal platform used by governments and organizations to manage and publish collections of data, powering numerous data portals worldwide | Imaging & AI Datasets | Multimodal Imaging |
CLSA (Canadian Longitudinal Study on Aging) | Tracks 50,000+ Canadians over 20 years to analyze aging, genetics, lifestyle, and environmental factors. | Imaging & AI Datasets | Multimodal Imaging |
CMS Medicare & Medicaid Data | Includes Medicare and Medicaid claims data, utilization, and provider information. | REVIEW | REVIEW |
COSMIC (Catalogue of Somatic Mutations in Cancer) | Catalog of somatic mutations in cancer from sequencing studies. | Disease-Specific Data | Cancer |
COVID-19 Community Vulnerability Index (CCVI) | Social and healthcare factors contributing to COVID-19 disparities. | Imaging & AI Datasets | Multimodal Imaging |
CRISPR Screen Data from Broad Institute | Gene knockout & perturbation datasets for understanding disease pathways and drug discovery. | Systems Biology & Modeling | Pathway Databases |
CXR8 Chest X-ray Dataset | 112,000+ labeled chest X-ray images with 14 different pathologies, ideal for AI-based disease detection models. | Imaging & AI Datasets | Multimodal Imaging |
CalorieKing Food Database | A trusted food database offering nutrition facts for favorite brands and fast-food restaurants, along with tools like a free online calorie counter to assist with dietary tracking. | Public Health & Epidemiology | Nutrition Data |
CalorieNinjas - Nutrition Facts and Recipe API | Provides an easy-to-use nutrition facts and recipe API, offering nutritional information for a vast array of foods, including fast-food items, to support dietary tracking and analysis. | Public Health & Epidemiology | Nutrition Data |
Cambridge Centre for Ageing and Neuroscience (Cam-CAN) | Brain imaging dataset for aging and cognitive neuroscience research. | Imaging & AI Datasets | Multimodal Imaging |
Canadian Longitudinal Study on Aging (CLSA) | A national, longitudinal study following approximately 50,000 men and women aged 45 to 85 at recruitment for at least 20 years to collect information on aging. | Imaging & AI Datasets | Multimodal Imaging |
Cancer Cell Line Encyclopedia (CCLE) | Large-scale database of cancer cell lines for drug response and genomic profiling. | Disease-Specific Data | Cancer |
Cancer Dependency Map (DepMap) | Systematic mapping of cancer cell dependencies and drug targets. | Disease-Specific Data | Cancer |
Cancer Imaging Archive (TCIA) | A massive public repository of medical imaging data for training AI-driven cancer detection models. | Disease-Specific Data | Cancer |
Centers for Medicare & Medicaid Services (CMS) | Healthcare utilization data, including disparities in service use among Medicaid and Medicare populations | REVIEW | REVIEW |
ChEMBL | A manually curated chemical database of bioactive molecules with drug-like properties, maintained by the European Bioinformatics Institute (EBI), providing information on compound bioactivity data against drug targets. | Imaging & AI Datasets | Multimodal Imaging |
ChEMBL | Manually curated database of bioactive molecules with drug-like properties. | Imaging & AI Datasets | Multimodal Imaging |
Chan Zuckerberg Biohub Cell Atlas | Comprehensive cell atlas mapping human cells to understand disease biology. | REVIEW | REVIEW |
ChemSpider | A free chemical structure database providing fast access to over 100 million structures, properties, and associated information. | Imaging & AI Datasets | Multimodal Imaging |
Chinese Health and Retirement Longitudinal Study (CHARLS) | A nationally representative longitudinal study of Chinese residents aged 45 and older, collecting a wide range of information on their health and economic status. | Imaging & AI Datasets | Multimodal Imaging |
ClinVar | A freely available resource on clinically relevant genetic variants. | REVIEW | REVIEW |
Clinical Cohort at BioLINCC | Clinical and genetic disease datasets hosted by NHLBI BioLINCC. | REVIEW | REVIEW |
Clinical Pharmacogenetics Implementation Consortium (CPIC) Database | A curated pharmacogenomic database providing guidelines for drug-gene interactions in personalized medicine. | Imaging & AI Datasets | Multimodal Imaging |
ClinicalTrials.gov | A registry of publicly and privately funded clinical trials worldwide. | REVIEW | REVIEW |
ClinicalTrials.gov Diabetes Studies | Searchable database of diabetes-focused clinical trials. | Disease-Specific Data | Diabetes |
Collaborative Drug Discovery (CDD) Vault | A web-based database solution for managing drug discovery data, focusing on small molecules and associated bio-assay data, facilitating collaboration among research teams. | REVIEW | REVIEW |
Common Crawl | A nonprofit organization that crawls the web and freely provides its archives and datasets to the public, consisting of petabytes of data collected since 2008 | Imaging & AI Datasets | Multimodal Imaging |
Comparative Toxicogenomics Database (CTD) | A publicly available resource that curates scientific data describing relationships between chemicals, genes, and diseases, including information on environmental exposures linked to neurodegenerative diseases like Alzheimer's and Parkinson's. | Disease-Specific Data | Parkinsons Disease |
ConnectomeDB | Repository of structural and functional connectivity MRI studies. | Imaging & AI Datasets | Multimodal Imaging |
County Health Rankings & Roadmaps | Database ranking health disparities and social determinants at the county level. | Public Health & Epidemiology | Health Disparities |
DGV (Database of Genomic Variants) | A catalog of genomic structural variations in humans. | Imaging & AI Datasets | Multimodal Imaging |
DIAAS Dataset (Digestible Indispensable Amino Acid Score) | Global reference database for protein quality assessment based on amino acid digestibility. | Public Health & Epidemiology | Nutrition Data |
DNA DataBank of Japan (DDBJ) | A DNA sequence repository. | General Research Repositories | Multidisciplinary Data |
Data Commons | An open-source platform created by Google that provides an open knowledge graph, combining economic, scientific, and other public datasets into a unified view | REVIEW | REVIEW |
Data Sharing for Demographic Research (DSDR) | Advances research on maternal and child health by making demographic data discoverable and accessible for secondary analysis, adhering to FAIR principles. | REVIEW | REVIEW |
Data for Global Health Equity Repository | Provides over 70 datasets on SDOH across multiple countries, aiming to inform policies and programs to reduce health inequities. | Public Health & Epidemiology | Health Disparities |
Data.gov | The U.S. government's open data site, providing access to datasets from various federal agencies. | REVIEW | REVIEW |
DataONE | A network of interoperable data repositories facilitating data sharing, discovery, and open science, particularly in the Earth and environmental sciences | REVIEW | REVIEW |
Database of Genomic Variants Archive (DGVa) | A repository for genomic structural variation. | Imaging & AI Datasets | Multimodal Imaging |
Database of Interacting Proteins (DIP) | A database of experimentally validated protein interactions. | Imaging & AI Datasets | Multimodal Imaging |
DeepChem | An open-source toolkit integrating deep learning with chemistry, providing datasets and models to accelerate drug discovery using AI. | REVIEW | REVIEW |
DeepChem AI for Drug Discovery | Open-source AI/ML models and datasets for automated drug discovery and predictive modeling. | Imaging & AI Datasets | Multimodal Imaging |
Demographic and Health Surveys (DHS) | Data on maternal/child health, nutrition, and infectious diseases in developing countries. | Public Health & Epidemiology | Nutrition Data |
Diabetes Genes Database (T2D-Genes) | Genetic database linking Type 2 diabetes to genetic variations. | Disease-Specific Data | Diabetes |
Diabetes Prevention Program (DPP) | Longitudinal study tracking the effectiveness of diabetes prevention programs. | Disease-Specific Data | Diabetes |
Dietary Supplement Ingredient Database (DSID) | Developed by the U.S. Department of Agriculture in collaboration with the National Institutes of Health, the DSID provides estimated levels of ingredients in dietary supplement products sold in the United States, aiding in the assessment of nutrient intake from supplements. | Public Health & Epidemiology | Nutrition Data |
DisGeNET | A discovery platform integrating information on gene-disease associations, aiding in the exploration of genetic and environmental factors contributing to chronic diseases. | Imaging & AI Datasets | Multimodal Imaging |
Dr. Duke's Phytochemical and Ethnobotanical Databases | Developed by Dr. James A. Duke at the USDA, this database provides detailed information on the phytochemical constituents of plants, their ethnobotanical uses, and associated biological activities. It serves as a valuable resource for exploring the chemical compounds in plants and their traditional medicinal applications. | Imaging & AI Datasets | Multimodal Imaging |
Drug-Induced Liver Injury Network (DILIN) | Research network focused on drug-induced liver injury. | REVIEW | REVIEW |
DrugBank | Comprehensive resource for in silico drug discovery and exploration. | REVIEW | REVIEW |
DrugBank | A unique bioinformatics and cheminformatics resource that combines detailed drug data with comprehensive drug target information, supporting pharmaceutical research and drug development. | REVIEW | REVIEW |
Dryad | An international open-access repository of research data, particularly data underlying scientific and medical publications, making data discoverable, freely reusable, and citable. | General Research Repositories | Multidisciplinary Data |
Dryad Digital Repository | An open data repository for scientific and medical research data. | General Research Repositories | Multidisciplinary Data |
ECHO Normal Database | Normal echocardiography database for reference values. | Clinical & Cohort Data | Longitudinal Cohort |
ECHO-NET Dynamic | Deep learning database for echocardiography analysis. | Clinical & Cohort Data | Longitudinal Cohort |
EMBL Nucleotide Sequence Database (ENA) | A nucleotide sequence database. | REVIEW | REVIEW |
EMory BrEast imaging Dataset (EMBED) | A racially diverse dataset of 3.5 million screening and diagnostic mammograms from 116,000 women, including annotated lesions linked to imaging descriptors and pathologic outcomes. | Imaging & AI Datasets | Multimodal Imaging |
ENCODE | Encyclopedia of DNA elements, providing functional genomic data. | Imaging & AI Datasets | Multimodal Imaging |
ENCODE (Encyclopedia of DNA Elements) | A public research project that aims to build a comprehensive parts list of functional elements in the human genome, providing data on genome-wide mapping of regulatory elements, transcription factor binding sites, histone modifications, chromatin accessibility, and RNA transcripts. | Imaging & AI Datasets | Multimodal Imaging |
EPA Integrated Risk Information System (IRIS) | A database of risk assessments for environmental substances, including their immunotoxicological effects. | Imaging & AI Datasets | Multimodal Imaging |
Edamam Food Database API | Offers a food database and nutrition data API, providing detailed nutritional information for various foods, including fast-food items, to support health and wellness applications. | Public Health & Epidemiology | Nutrition Data |
Electronic Medical Records and Genomics (eMERGE) Network | Genomic and electronic health record integration for cardiovascular studies. | Clinical & Cohort Data | Longitudinal Cohort |
English Longitudinal Study of Ageing (ELSA) | A multidisciplinary study collecting data on the health, social, wellbeing, and economic aspects of aging in England. | Imaging & AI Datasets | Multimodal Imaging |
English Longitudinal Study of Ageing (ELSA) | A longitudinal study collecting multidisciplinary data from a representative sample of the English population aged 50+, focusing on aging, health trajectories, and socioeconomic factors. | Imaging & AI Datasets | Multimodal Imaging |
Ensembl Genome Browser | Genome browser for exploring annotated genes and variants. | REVIEW | REVIEW |
Ensembl Parkinson Disease Genomics | Genomic database integrating Parkinson? disease-associated mutations. | Disease-Specific Data | Parkinsons Disease |
Environmental Data Initiative Repository | A repository for environmental research data. | General Research Repositories | Multidisciplinary Data |
Environmental Genome Project (EGP) | Focuses on understanding the impact of environmental exposures on human disease by studying genetic susceptibility, including genes involved in immune responses. | Imaging & AI Datasets | Multimodal Imaging |
Environmental Influences on Child Health Outcomes (ECHO) Program | ECHO investigates how environmental exposures in early development?from conception through early childhood?influence child health outcomes, including pregnancy outcomes. | Imaging & AI Datasets | Ultrasound |
Environmental Justice Screening and Mapping Tool (EJSCREEN) | EPA tool mapping environmental and social justice health disparities. | Public Health & Epidemiology | Health Disparities |
Environmental Public Health Tracking Network (EPHTN) | A system by the CDC providing data on environmental exposures and health outcomes, facilitating research on environmental factors in chronic disease prevention. | Imaging & AI Datasets | Multimodal Imaging |
Environmental Risk Factors for Alzheimer's and Parkinson's Diseases Database | A database compiling information on environmental risk factors, such as air pollution and pesticide exposure, associated with the incidence and progression of Alzheimer's and Parkinson's diseases, supporting research into environmental determinants of these neurodegenerative conditions. | Disease-Specific Data | Parkinsons Disease |
Eukaryotic Pathogen Database Resources (EuPathDB) | A genomic database for eukaryotic pathogens. | REVIEW | REVIEW |
European Genome-Phenome Archive (EGA) | A European repository for genotype and phenotype data. | General Research Repositories | Multidisciplinary Data |
European Longitudinal Study of Pregnancy and Childhood (ELSPAC) | ELSPAC is a longitudinal study that investigates the health and development of children in relation to environmental factors during pregnancy and early childhood across several European countries. | Imaging & AI Datasets | Multimodal Imaging |
European Prospective Investigation into Cancer and Nutrition (EPIC) | A large cohort study investigating the relationships between diet, nutritional status, lifestyle, environmental factors, and the incidence of chronic diseases. | Disease-Specific Data | Cancer |
European Union Open Data Portal | European Union institutions and bodies. | REVIEW | REVIEW |
ExRNA Atlas for Parkinson? Disease | Atlas of extracellular RNA biomarkers for neurodegenerative diseases. | Disease-Specific Data | Parkinsons Disease |
Exposome Explorer | A database of biomarkers related to environmental exposures and their potential immunological impacts. | Imaging & AI Datasets | Multimodal Imaging |
FDA Adverse Event Reporting System (FAERS) | Database containing information on adverse event and medication error reports submitted to the FDA. | REVIEW | REVIEW |
FDA OTC Database | The FDA Over-the-Counter (OTC) Database provides information on approved OTC drugs, including active ingredients, formulations, labeling, and regulatory status. | Imaging & AI Datasets | Multimodal Imaging |
FDA Open Data | A collection of publicly available datasets from the U.S. FDA. | Imaging & AI Datasets | Multimodal Imaging |
FRAILOMIC (Frailty & Aging Biomarkers) | A multi-omics dataset designed to predict frailty, cognitive decline, and healthy aging biomarkers. | Imaging & AI Datasets | Multimodal Imaging |
Fast Food Nutrition Dataset - Kaggle | A comprehensive dataset providing nutritional information for various fast food products from popular chains, including calorie counts, macronutrients, and micronutrients. | Public Health & Epidemiology | Nutrition Data |
Fast Food Nutrition Facts | Provides nutritional facts, Weight Watchers points, allergens, and ingredients for menu items from various fast food restaurants, allowing users to make informed dietary choices. | Public Health & Epidemiology | Nutrition Data |
Fast Food Nutritional Database - GitHub | An ETL project compiling nutritional information from several national U.S. fast-food chains into a relational database, facilitating analysis and comparison of nutritional content across different restaurants. | Public Health & Epidemiology | Nutrition Data |
FatSecret Platform API | Provides access to a vast dataset of global food nutrition information, including data from fast-food franchises, supporting applications in meal planning and dietary analysis. | Public Health & Epidemiology | Nutrition Data |
Figshare | An open-access repository where researchers can preserve and share their research outputs, including datasets, images, and videos | General Research Repositories | Multidisciplinary Data |
FinnGen Diabetes Data | Finnish biobank with genetic and clinical diabetes data. | Disease-Specific Data | Diabetes |
FinnGen Parkinson? Disease Data | Finnish biobank study linking Parkinson? to genetic and clinical data. | Disease-Specific Data | Parkinsons Disease |
Firebrowse (Broad Institute TCGA Data Access) | TCGA dataset access tool with curated genomic and clinical data. | REVIEW | REVIEW |
Florida Alzheimer Disease Research Center (ADRC) | The National Alzheimer�s Coordinating Center (NACC) functions as the centralized data repository, and collaboration and communication hub, for the National Institute on Aging�s (NIA) Alzheimer�s Disease Research Centers (ADRC) Program. | Disease-Specific Data | Alzheimers Disease |
Florida Behavioral Risk Factor Surveillance System (BRFSS) | Health risk behavior data from Florida's adult population. | Public Health & Epidemiology | Population Health |
Florida Birth Defects Registry (FBDR) | Registry tracking birth defects and congenital anomalies in Florida. | Imaging & AI Datasets | Multimodal Imaging |
Florida CHARTS (Community Health Assessment Resource Tool Set) | Statewide public health data including mortality, disease, and demographics. | REVIEW | REVIEW |
Florida COVID-19 Data and Surveillance | COVID-19 surveillance and case reporting in Florida. | REVIEW | REVIEW |
Florida Cancer Data System (FCDS) | Statewide cancer registry collecting incidence and survival data. | Disease-Specific Data | Cancer |
Florida Department of Health - Public Health Statistics | Comprehensive health statistics and disease surveillance for Florida. | REVIEW | REVIEW |
Florida Environmental Public Health Tracking | Tracking environmental factors and their effects on public health in Florida. | Imaging & AI Datasets | Multimodal Imaging |
Florida HIV/AIDS Surveillance Program | HIV/AIDS case surveillance and epidemiological tracking in Florida. | REVIEW | REVIEW |
Florida Health Data Warehouse | Centralized warehouse for Florida public health datasets. | REVIEW | REVIEW |
Florida Health Equity and Disparities Data | Health equity data tracking disparities among Florida communities. | REVIEW | REVIEW |
Florida Injury Surveillance System (FL-ISS) | Statewide injury surveillance and prevention data. | REVIEW | REVIEW |
Florida Medicaid Data | Medicaid health data for policy and healthcare analysis. | REVIEW | REVIEW |
Florida Prescription Drug Monitoring Program (PDMP) | Prescription drug monitoring program to reduce opioid misuse. | REVIEW | REVIEW |
Florida Rural Health Research Data | Health data focused on rural populations in Florida. | REVIEW | REVIEW |
Florida Trauma Registry | Statewide trauma registry collecting injury and emergency response data. | Imaging & AI Datasets | Multimodal Imaging |
Florida Vital Statistics | Florida birth, death, and marriage records for health research. | REVIEW | REVIEW |
FlyBase | A database for Drosophila genetics and research. | REVIEW | REVIEW |
FooDB | A database containing detailed compositional data on food and its metabolites. | REVIEW | REVIEW |
FooDB | The world's largest resource on food constituents, chemistry, and biology, providing detailed information about chemical compounds found in food. | REVIEW | REVIEW |
FooDB (The Food Database) | A comprehensive resource detailing the chemical composition of foods, including information on macronutrients and micronutrients such as vitamins and minerals, as well as their known health effects. | Imaging & AI Datasets | Multimodal Imaging |
Food Access Research Atlas (USDA) | Provides data on food deserts and food insecurity by census tract. | Public Health & Epidemiology | Population Health |
Food Frequency Questionnaire (FFQ) Data | FFQs are standardized questionnaires used to assess habitual dietary intake over a specified period, providing valuable data for studying associations between dietary patterns and health outcomes. | Disease-Specific Data | Cancer |
Food Metabolome Repository | A repository for food metabolome data obtained using liquid chromatography-mass spectrometry (LC-MS). | Imaging & AI Datasets | Multimodal Imaging |
Food and Microbiome Longitudinal Investigation | A dataset from NYU researchers focusing on the longitudinal study of diet and its impact on the human microbiome. | Public Health & Epidemiology | Nutrition Data |
FoodRepo: An Open Food Repository | An open food repository of barcoded food items, programmatically accessible through an API, suitable for large-scale studies in digital nutrition. | Public Health & Epidemiology | Nutrition Data |
Framingham Heart Study | Longitudinal cardiovascular study tracking risk factors for heart disease. | Clinical & Cohort Data | Longitudinal Cohort |
Functional Connectomes Project International Neuroimaging Data-Sharing Initiative (FCP/INDI) | A neuroimaging data-sharing platform. | Imaging & AI Datasets | Multimodal Imaging |
GEO (Gene Expression Omnibus) | A repository of functional genomics datasets. | Imaging & AI Datasets | Multimodal Imaging |
GISAID | Global Initiative on Sharing Avian Influenza Data, focused on SARS-CoV-2 genome sequences. | REVIEW | REVIEW |
GISAID (Genomic Epidemiology of Viruses) | Public Health & Epidemiology Data | REVIEW | REVIEW |
GMrepo | A curated human gut microbiome database with a focus on disease markers and cross-dataset comparisons. | REVIEW | REVIEW |
GPM DB | A proteomics database for protein identification. | REVIEW | REVIEW |
GTEx (Genotype-Tissue Expression Project) | A resource linking genetic variation with gene expression in multiple tissues. | Imaging & AI Datasets | Multimodal Imaging |
GenBank | A comprehensive sequence database. | REVIEW | REVIEW |
Gene Expression Omnibus (GEO) | A gene expression repository. | Genomics & Multi-Omics | Transcriptomics |
Gene Expression Omnibus (GEO) | Repository of high-throughput gene expression and hybridization array data. | Genomics & Multi-Omics | Transcriptomics |
Genetic Perturbation Platform (GPP) | Provides resources for analyzing CRISPR and RNAi screening data. | REVIEW | REVIEW |
Genetics of Alzheimer's Disease Data (NIAGADS) | Genetic repository for Alzheimer? disease GWAS and sequencing data. | Disease-Specific Data | Alzheimers Disease |
Genetics of Type 2 Diabetes (GoT2D) | Comprehensive genetic study of Type 2 diabetes risk factors. | Disease-Specific Data | Diabetes |
Genome Aggregation Database (gnomAD) | A large-scale reference database of human genetic variation. | REVIEW | REVIEW |
Genome Aggregation Database (gnomAD) | A resource for aggregated human genetic variation data from multiple sequencing projects. | Imaging & AI Datasets | Multimodal Imaging |
GenomeRNAi | A database for RNAi screening data. | REVIEW | REVIEW |
Genomic Data Commons (GDC) | Centralized repository for cancer genomics data. | Disease-Specific Data | Cancer |
Genomic Data Commons (GDC) Data Portal | NCI's unified data repository for cancer genomic research. | Disease-Specific Data | Cancer |
Genomics of Parkinson? Disease (GP2) | Global Parkinson? genomics project analyzing genetic risk factors. | Disease-Specific Data | Parkinsons Disease |
German Neuroinformatics Node/G-Node (GIN) | A neuroscience research data repository. | General Research Repositories | Multidisciplinary Data |
GeroSense Wearable Data | AI-based biological aging clocks from real-world wearable devices (Fitbit, Apple, Garmin). | REVIEW | REVIEW |
GigaDB | A database for large-scale biological data. | REVIEW | REVIEW |
Global Biodiversity Information Facility (GBIF) | A global biodiversity database. | REVIEW | REVIEW |
Global Burden of Disease Study (GBD) | A comprehensive regional and global research program assessing mortality and disability from major diseases, injuries, and risk factors, providing insights into environmental determinants of chronic diseases. | Imaging & AI Datasets | Multimodal Imaging |
Global Diabetes Footprint Dataset | Global study tracking the impact of diabetes worldwide. | Disease-Specific Data | Diabetes |
Global Health Observatory (WHO) | Global health inequalities across regions. | REVIEW | REVIEW |
Global Microbiome Dataset (GMrepo) | Multi-continent human microbiome sequencing dataset for gut health research and immune system studies. | REVIEW | REVIEW |
Global Network Maternal and Newborn Health Registry | Registry tracking maternal and newborn health outcomes in low-resource settings. | REVIEW | REVIEW |
Global Nutrition Report Dataset | Contains data for all indicators used in country profiles, compiled from sources like UNICEF, WHO, and the World Bank. | Public Health & Epidemiology | Nutrition Data |
Global Virus Network (GVN) | Early-warning system for new pandemics & viral outbreaks, providing surveillance of emerging infectious diseases. | Imaging & AI Datasets | Multimodal Imaging |
Glycemic Index Research Database | Database on the glycemic index of foods and their impact on blood sugar. | Imaging & AI Datasets | Multimodal Imaging |
Google BigQuery Public Datasets | A collection of open datasets optimized for cloud-based big data analysis. | Imaging & AI Datasets | Multimodal Imaging |
Google Dataset Search | A tool that enables users to discover datasets stored across the web, covering various disciplines and topics. | REVIEW | REVIEW |
Google DeepMind?s AlphaFold Protein Structure Database | AI-driven protein structure predictions, accelerating drug discovery and protein engineering. | Imaging & AI Datasets | Multimodal Imaging |
Google Genomics | A cloud-based platform for storing and analyzing genomic data. | REVIEW | REVIEW |
Gut Microbiome-Metabolome Dataset Collection | A curated collection of unified data tables from 14 different human gut microbiome-metabolome studies. | Imaging & AI Datasets | Multimodal Imaging |
HDPulse Data Portal The Data Portal characterizes the burden of disparities across the United States and within communities | HDPulse Data Portal The Data Portal characterizes the burden of disparities across the United States and within communities | Imaging & AI Datasets | Multimodal Imaging |
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