top of page
Database Name/Link
Data Description
Category
Subcategory
MIMIC-IV (Medical Information Mart for Intensive Care)
Comprehensive ICU dataset + cardiovascular and EKG recordings.
Clinical & Cohort Data
Heart Disease
Mapping Disparities by Social Determinants of Health - CMS
Displays selected measures from the SDOH dataset in an interactive visual format.
Public Health & Epidemiology
Health Disparities
Mass spectrometry Interactive Virtual Environment (MassIVE)
A mass spectrometry data-sharing platform.
Drug Discovery
MS
Materials Cloud
A platform designed to enable open and seamless sharing of resources for computational science, driven by applications in materials modeling
General Research Repositories
Large Dataset Distribution
MedMNIST v2
A large-scale lightweight benchmark for 2D and 3D biomedical image classification, consisting of 708,069 2D images and 10,214 3D images across various tasks.
Clinical & Cohort Data
Multimodal Imaging
Medical Imaging Database
A large open-source medical imaging database containing images from over 12,000 patients, covering 9,000 topics with over 59,000 images.
Clinical & Cohort Data
Multimodal Imaging
Medical Segmentation Decathlon
A collection of medical image segmentation datasets, containing a total of 2,633 three-dimensional images across multiple anatomies and modalities.
Clinical & Cohort Data
Multimodal Imaging
MetaboLights
A global database for metabolomics studies, including raw experimental data and associated metadata.
Metabolomics
Large Dataset Distribution
MetaboLights
A metabolomics research data repository.
Metabolomics
Large Dataset Distribution
Metabolomics Workbench
A metabolomics research resource.
Metabolomics
Large Dataset Distribution
Metabolomics Workbench
A repository for metabolomics data and tools, supporting the sharing and analysis of metabolomics studies.
Metabolomics
Multidisciplinary Data
MethBase
A database providing single-CpG site resolution methylation levels across various species, including humans, chimpanzees, gorillas, rhesus macaques, mice, and Arabidopsis, facilitating the study of DNA methylation patterns and their implications.
Genomics & Multi-Omics
DNA methylation patterns
Mexican Health and Aging Study (MHAS)
A panel study examining the aging process and its disease burden among older adults in Mexico.
Public Health & Epidemiology
Aging
Michael J. Fox Foundation Parkinson? Data
Michael J. Fox Foundation's open-access data on Parkinsons genetics and biomarkers.
Disease-Specific Data
Parkinsons Disease
Microbiome Stress Project
Metagenomic datasets linking environmental stress, diet, and microbiome composition.
Immunology
Environmental

 

© 2025 by Center of Excellence – Consortium of Educators.

 

bottom of page